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CGM - Centre de Génétique Moléculaire

Les publications des chercheurs du CGM : 2005

 

ligne séparation   MàJ : 12/03/07

 

Publications 2005 : 74 références

 

- Alonso, A., Pucciarelli, M. G., Figueroa-Bossi, N. and García-del-Portillo, F. (2005) Increased excision of the Salmonella defective prophage ST64B caused by a deficiency in Dam methylase. J Bacteriol, 187 (23) 7901-11.

- Ballut, L., Marchadier, B., Baguet, A., Tomasetto, C., Seraphin, B. and Le Hir, H. (2005) The exon junction core complex is locked onto RNA by inhibition of eIF4AIII ATPase activity. Nat Struct Mol Biol, 12 (10) 861-9.

- Barbey, R., Baudouin-Cornu, P., Lee, T. A., Rouillon, A., Zarzov, P., Tyers, M. and Thomas, D. (2005) Inducible dissociation of SCF(Met30) ubiquitin ligase mediates a rapid transcriptional response to cadmium. EMBO J, 24 (3) 521-32.

- Barre, F.-X. and Sherratt, D. J. (2005) Chromosome dimer resolution. In The bacterial chromosome N. P. Higgins (Ed.), ASM press,

- Benabdelhak, H., Schmitt, L., Horn, C., Jumel, K., Blight, M. A. and Holland, I. B. (2005) Positive co-operative activity and dimerization of the isolated ABC ATPase domain of HlyB from Escherichia coli. Biochem J, 386 (pt3) 489-95.

- Bernard, D., Quevillon-Cheruel, S., Merchant, S., Guiard, B. and Hamel, P. (2005) Cyc2p, a membrane-bound flavoprotein involved in the maturation of mitochondrial c-type cytochromes. J Biol Chem, 280 (48) 39852-9.

- Besse, F., Busson, D. and Pret, A.-M. (2005) Hedgehog signal transduction controls germ cell-soma interactions during Drosophila ovarian morphogenesis. Dev Dynamics, 234 (2) 422-431.

- Bianchin, C., Mauxion, F., Sentis, S., Seraphin, B. and Corbo, L. (2005) Conservation of the deadenylase activity of proteins of the Caf1 family in human. RNA, 11 (4) 487-97.

- Bigot, S., Saleh, O. A., Lesterlin, C., Pages, C., El Karoui, M., Dennis, C., Grigoriev, M., Allemand, J.-F., Barre, F.-X. and Cornet, F. (2005) KOPS: DNA motifs that control E. coli chromosome segregation by orienting the FtsK translocase. EMBO J, 24 3770-3780.

- Blanc-Potard, A. B., Labesse, G., Figueroa-Bossi, N. and Bossi, L. (2005) Mutation at the "exit gate" of the Salmonella gyrase a subunit suppresses a defect in the gyrase B subunit. J Bacteriol, 187 (19) 6841-4.

- Blight, M. A. (2005) Deciphering Host-Pathogen Interactions: A voyage through several model systems. HDR, Paris XI.

- Boccard, F., Esnault, E. and Valens, M. (2005) Spatial arrangement and macrodomain organization of bacterial chromosomes. Molecular Microbiology, 57 (1) 9-16.

- Boireau, W., Duncan, A. C. and Pompon, D. (2005) Bioengineering and characterization of DNA-protein assemblies floating on supported membranes. in Methods in Molecular Biology 300, T. Vo-Dinh (Ed.), Humana Press, Totowa, NJ.

- Boireau, W., Zeeh, J. C., Puig, P. E. and Pompon, D. (2005) Unique supramolecule asembly of a redox protein with nucleic acids onto hybrid bilayer: toward a dynamic DNA chip. Biosensors and Bioelectronics, 15 (20) 1631-7.

- Bossi, L. and Figueroa-Bossi, N. (2005) Prophage arsenal of Salmonella enterica serovar Typhimurium. in Phages: Their Role in Bacterial Pathogenesis and Biotechnology 165-186, M. Waldor, D. Friedman and S. Adhya (Ed.), ASM Press, Washington, DC.

- Brodie Of Brodie, E. B., Nicolay, S., Touchon, M., Audit, B., d'Aubenton-Carafa, Y., Thermes, C. and Arneodo, A. (2005) From DNA Sequence Analysis to Modeling Replication in the Human Genome. Phys Rev Lett, 94 248103.

- Buffin, E., Lefebvre, C., Huang, J., Gagkou, M. E. and Karess, R. E. (2005) Recruitment of Mad2 to the kinetochore requires the Rod/Zw10 complex. Curr Biol, 15 856-61.

- Casselyn, M., Tardieu, A., Delacroix, H. and Finet, S. (2005) Nucleation and Growth Kinetics of Brome Mosaic Virus Microcrystals. in ESFR Hightlights 2004, Soft Condensed Matter G. Admans (Ed.), ESFR Comm. Press,

- Cerchia, L., Duconge, F., Pestourie, C., Boulay, J., Aissouni, Y., Gombert, K., Tavitian, B., de Franciscis, V. and Libri, D. (2005) Neutralizing aptamers from whole-cell SELEX inhibit the RET receptor tyrosine kinase. PLoS Biol, 3 (4) e123.

- Chacinska, A., Lind, M., Frazier, A. E., Dudek, J., Meisinger, C., Geissler, A., Sickmann, A., Meyer, H. E., Truscott, K. N., Guiard, B., Pfanner, N. and Rehling, P. (2005) Mitochondrial presequence translocase: switching between TOM tethering and motor recruitment involves Tim21 and Tim17. Cell, 120 (6) 817-29.

- Chiron, S. (2005) Etude de la traduction mitochondriale chez la levure S. pombe. Thèse, Paris Sud 11.

- Chiron, S., Suleau, A. and Bonnefoy, N. (2005) Mitochondrial translation: elongation factor tu is essential in fission yeast and depends on an exchange factor conserved in humans but not in budding yeast. Genetics, 169 (4) 1891-901.

- Chodagam, S., Royou, A., Whitfield, W., Karess, R. and Raff, J. W. (2005) The centrosomal protein CP190 regulates myosin function during early Drosophila development. Curr Biol, 15 (14) 1308-13.

- Coombes, B. K., Wickham, M. E., Brown, N. F., Lemire, S., Bossi, L., Hsiao, W. W., Brinkman, F. S. and Finlay, B. B. (2005) Genetic and molecular analysis of GogB, a phage-encoded type III-secreted substrate in Salmonella enterica serovar typhimurium with autonomous expression from its associated phage. J Mol Biol, 348 (4) 817-30.

- Cordin, O. (2005) Characterisation of the Q-motif of DEAD-box RNA helicases. Thèse, Versailles Saint-Quentin et Genève.

- Daniel, J. (2005) Sir-dependent downregulation of various aging processes. Mol Genet Genomics, 274 (5) 539-47.

- de Rosa, R., Prud'homme, B. and Balavoine, G. (2005) caudal and even-skipped in the annelid Platynereis dumerilii and the ancestry of posterior growth. Evol Dev, 7 574-587.

- Elde, N. C., Morgan, G., Winey, M., Sperling, L. and Turkewitz, A. P. (2005) Elucidation of clathin-mediated endocytosis in Tetrahymena reveals an evolutionarily convergent recruitment of dynamin. PLoS Genetics, 1 (5) e52.

- Gogendeau, D., Keller, A.-M., Yanagi, A., Cohen, J. and Koll, F. (2005) ND6p, a novel protein wiht RCC1 domains involved in exosytosis in Paramecium. Eukaryotic Cell, 4 2129-2139.

- Herbreteau, C., Weill, L., Decimo, D., Prévôt, D., Darlix, J.-L., Sargueil, B. and Ohlman, T. (2005) HIV-2 genomic RNA contains a novel type of IRES located downstream to its initiation codon. Nat Struct Mol Biol, 12 (11) 1001-7.

- Hlavacek, O., Bourens, M., Salone, V., Lachacinski, N., Lemaire, C. and Dujardin, G. (2005) The transcriptional activator HAP4 is a high copy suppressor of an oxa1 yeast mutation. Gene, 354 53-7.

- Karess, R. (2005) Rod-Zw10-Zwilch: a key player in the spindle checkpoint. Trends Cell Biol, 7 386-92.

- Kleino, A., Valanne, S., Ulvila, J., Kallio, J., Myllymaki, H., Enwald, H., Stoven, S., Poidevin, M., Ueda, R., Hultmark, D., Lemaitre, B. and Ramet, M. (2005) Inhibitor of apoptosis 2 and TAK1-binding protein are components of the Drosophila Imd pathway. EMBO J, 24 (19) 3423-34.

- Lemaire, C., Negroni, L., Guillot, A., Marsy, S., Zivy, M. and Dujardin, G. (2005) LC-MS/MS identification of the mitochondrial respiratory complex subunits separated on one-dimensional BN-PAGE in Saccharomyces cerevisae wild type and mutant strains. Mol Cell Proteomics, 4 (8) S382.

- Lesterlin, C., Mercier, R., Boccard, F., Barre, F.-X. and Cornet, F. (2005) Roles for replichores and macrodomains in segregation of the Escherichia coli chromosome. EMBO Rep, 6 (6) 557-562.

- Longo, A., Leonard, C. W., Bassi, G. S., Berndt, D., Krahn, J. M., Hall, T. M. and Weeks, K. M. (2005) Evolution from DNA to RNA recognition by the bI3 LAGLIDADG maturase. Nat Struct Mol Biol, 12 (9) 779-87.

- Luchetta, P., Maurel, M.-C., Higuet, D. and Vervoort, M. (2005) Évolution moléculaire. Cours et questions de révision. Dunod (Ed.), Paris.

- Mengin-Lecreulx, D. and Lemaitre, B. (2005) Structure and metabolism of peptidoglycan and molecular requirements allowing its detection by the Drosophila innate immune system. J Endotoxin Res, 11 (2) 105-111.

- Meyer, E. and Beisson, J. (2005) Epigenetics: Paramecium as a model system. Médecine Sciences, 21 (4) 377-83.

- Morillon, A., Karabetsou, N., Nair, A. and Mellor, J. (2005) Differential lysine 4 methylation on histone H3 regulates RNA polymerase II. Mol Cell Biol, 18 (6) 723-34.

- Moulin, L., Rahmouni, A. R. and Boccard, F. (2005) Topological insulators inhibit diffusion of transcription-induced positive supercoils in the chromosome of E. coli. Molecular Microbiology, 55 (2) 601-610.

- Mounolou, J.-C. and Lacroute, F. (2005) Mitochondrial DNA: an advance in eukarotic cell biology in the 1960s. Biol Cell, 97 (9) 743-748.

- Mouratou, B., Biou, V., Joubert, A., Cohen, J., Shields, D. J., Geldner, N., Jurgens, G., Melancon, P. and Cherfils, J. (2005) The domain architecture of large guanine nucleotide exchange factors for the small GTP-binding protein Arf. BMC Genomics, 6 (1) 20.

- Olesen, J. R., Libri, D. and Jensen, T. H. (2005) A link between transcription and mRNP quality in Saccharomyces cerevisiae. RNA Biology, 2 45-48.

- Ouchane, S., Nitschke, W., Bianco, P., Vermeglio, A. and Astier, C. (2005) Multiple Rieske genes in prokaryotes: exchangeable Rieske subunits in the cytochrome bc-complex of Rubrivivax gelatinosus. Mol Microbiol, 57 (1) 261-75.

- Pierce, R. J., Wu, W., Hirai, H., Ivens, A., Murphy, L. D., Noel, C., Johnston, D. A., Artiguenave, F., Adams, M., Cornette, J., Viscogliosi, E., Capron, M. and Balavoine, G. (2005) Evidence for a Dispersed Hox Gene Cluster in the Platyhelminth Parasite Schistosoma Mansoni. Mol Biol Evol, 22 (12) 2491-2503.

- Pimenta, A., Racher, K., Jamieson, L., Blight, M. A. and Holland, I. B. (2005) Mutations in HlyD, part of the Type 1 translcoato for hemolysin secretion, affect the flding of the secreted toxin. J Bacteriol, 187 (21) 7471-80.

- Pret, A.-M. (2005) Signalisations et morphogenèse : l’ovogenèse chez la drosophile comme modèle d’étude. HDR, Paris 6.

- Raible, F., Tessmar-Raible, K., Osoegawa, K., Wincker, P., Jubin, C., Balavoine, G., Ferrier, D., Benes, V., de Jong, P., Weissenbach, J., Bork, P. and Arendt, D. (2005) Vertebrate-type intron-rich genes in the marine annelid Platynereis dumerilii. Science, 310 1325-1326.

- Ranck, J.-L., Halgand, F., Laprévote, O. and Reiss-Husson, F. (2005) Characterization of the core complex of Rubrivivax gelatinosus in a mutant devoid of the LH2 antenna. Biochim Biophys Acta (Bioenergetics), 1709 (3) 220-30.

- Rissler, M., Wiedemann, N., Pfannschmidt, S., Guiard, B., Pfanner, N. and Chacinska, A. (2005) The essential mitochondrial protein Erv1 cooperates with Mia40 in biogenesis of intermembrane space proteins. J Mol Biol, 353 485-92.

- Roudier, N., Lefebvre, C. and Legouis, R. (2005) CeVPS-27 is an Endosomal Protein Required for the Molting and the Endocytic Trafficking of the Low-Density Lipoprotein Receptor-Related Protein 1 in Caenorhabditis elegans. Traffic, 6 (8) 695-705.

- Ruiz, F., Garreau de Loubresse, N., Klotz, C., Beisson, J. and Koll, F. (2005) Centrin deficiency in Paramecium affects the geometry of basal body duplication. Curr Biol, 15 2097-2106.

- Saleh, O. A., Bigot, S., Barre, F.-X. and Allemand, J.-F. (2005) Analysis of DNA supercoil induction by FtsK indicates translocation without groove-tracking. Nat Struct Mol Biol, 12 (5) 436-40.

- Sanjuan Szklarz, L. K., Guiard, B., Rissler, M., Wiedemann, N., Kozjak, V., van der Laan, M., Lohaus, C., Marcus, K., Meyer, H. E., Chacinska, A., Pfanner, N. and Meisinger, C. (2005) Inactivation of the mitochondrial heat shock protein zim17 leads to aggregation of matrix hsp70s followed by pleiotropic effects on morphology and protein biogenesis. J Mol Biol, 351 (1) 206-18.

- Sellem, C. H., Lemaire, C., Lorin, S., Dujardin, G. and Sainsard-Chanet, A. (2005) Interaction between the oxa1 and rmp1 genes modulates respiratory complex assembly and lifespan in Podospora anserina. Genetics, 169 (3) 1379-89.

- Seoane, S., Guiard, B., Rodriguez-Torres, A. M. and Freire-Picos, M. A. (2005) Effects of splitting alternative KlCYC1 3'-UTR regions on processing: Metabolic consequences and biotechnological applications. J Biotechnol, 118 (2) 149-56.

- Séraphin, B. (2005) Biochemistry of protein complexes. in The Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics M. Dunn, L. Jorde, P. Little and S. Subramaniam (Ed.), Wiley, New York.

- Séraphin, B., Pamblanco, M., Faux, C. and Dziembowski, A. (2005) The Tandem Affinity Purification (TAP) strategy for protein complex characterization. in Cold Spring Harbor Laboratory Manual: Protein Interactions, A Molecular Cloning Manual, 2nd edition E. Golermis and I. Serebriiskii (Ed.), CSHL Press, Cold Spring Harbor, NY.

- Sybirna, K., Guiard, B., Li, Y. F., Bao, W. G., Bolotin-Fukuhara, M. and Delahodde, A. (2005) A new Hansenula polymorpha HAP4 homologue which contains only the N-terminal conserved domain of the protein is fully functional in Saccharomyces cerevisiae. Curr Genet, 47 (3) 172-81.

- Tabares, L. C., Cortez, N., Agalidis, I. and Un, S. (2005) Temperature-dependent coordination in E. coli manganese superoxide dismutase. J Am Chem Soc, 127 (16) 6039-47.

- Todescini, A. L., Morillon, A., Springer, M. and Lesage, P. (2005) Severe adenine starvation activates Ty1 transcription and retrotransposition in Saccharomyces cerevisiae. Mol Cell Biol, 25 (17) 7459-72.

- Touchon, M. (2005) Biais de composition chez les mamifères : rôles de la transcription et de la réplication. Thèse, Paris VII.

- Touchon, M., Nicolay, S., Audit, B., Brodie of Brodie, E. B., d'Aubenton-Carafa, Y., Arneodo, A. and Thermes, C. (2005) Replication-associated strand asymmetries in mammalian genomes: Toward detection of replication origins. Proc Natl Acad Sci USA, 102 9836-9841.

- Touchon, M., Nicolay, S., Audit, B., Brodie of Brodie, E. B., d'Aubenton-Carafa, Y., Arneodo, A. and Thermes, C. (2005) Replication-associated strand asymmetries in mammalian genomes: Toward detection of replication origins. JOBIM Proceedings. Lyon, France.

- Val, M.-E., Bouvier, M., Campos, J., Sherratt, D., Cornet, F., Mazel, D. and Barre, F.-X. (2005) The single-stranded genome of phage CTX is the form used for integration into the genome of Vibrio cholerae. Mol Cell, 19 (4) 559-66.

- van der Laan, M., Chacinska, A., Lind, M., Perschi, I., Sickmann, A., Meyer, H. E., Guiard, B., Meisinger, C., Pfanner, N. and Rehling, P. (2005) Pam17 is required for architecture and protein import activity of the presequence translocase-associated motor of mitochondria Pam17 is required for architecture and protein import activity of the mitochondrial Hsp70 motor. Mol Cell Biol, 25 7449-7458.

- Vodovar, N. (2005) Analyse génétique et génomique de l'interaction entre Drosophila melanogaster et Pseudomonas entomophila. Thèse, Paris 6.

- Vodovar, N., Vinals, M., Basset, A., Degrouard, J., Spelmann, P. T., Boccard, F. and Lemaitre, B. (2005) Drosophila host defense after oral infection by an entomopathogenic Pseudomonas species. Proc Natl Acad Sci USA, 102 (32) 11414-9.

- von Janowsky, B., Knapp, K., Major, T., Krayl, M., Guiard, B. and Voos, W. (2005) Structural properties of substrate proteins determine their proteolysis by the mitochondrial AAA+ protease Pim1. Biol Chem, 386 1307-17.

- Wassmer, T., Froissard, M., Plattner, H., Kissmehl, R. and Cohen, J. (2005) The vacuolar proton-ATPase plays a major role in several membrane-bounded organelles in Paramecium. J Cell Sci, 118 (13) 2813-25.

- Williams, E. H., Bsat, N., Bonnefoy, N., Butler, C. and Fox, T. D. (2005) Alteration of a novel dispensable mitochondrial ribosomal small-subunit protein, Rsm28p, allows translation of defective COX2 mRNAs. Eukaryot Cell, 4 (2) 337-45.

- Wyers, F., Rougemaille, M., Badis, G., Rousselle, J.-C., Dufour, M.-E., Boulay, J., Regnault, B., Devaux, F., Namane, A., Seraphin, B., Libri, D. and Jacquier, A. (2005) Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell, 121 (5) 725-37.

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