CGM - Centre de Génétique Moléculaire
Les publications des chercheurs du CGM : 2010
MàJ : 18/0511
Publications 2010 : 58 références dont 8 thèses et 1 HDR
- Aigrain, L. (2010) Conséquences de l'échange de domaines évolutivement éloignés sur l'activité et la géométrie de la NADPH-cytochrome P450 réductase. Thèse Université Paris-Sud 11. Soutenue le 13 octobre 2010, sous la direction de Gilles Truan.
- Alberti, A.*, Michelet, X.*, Djeddi, A.*, Legouis, R. (2010) The autophagosomal protein LGG-2 acts synergistically with LGG-1 in dauer formation and longevity in C. elegans. Autophagy, 6 (5) 622-633. *equal contribution.
- Arnaiz, O., Gout, J-F., Bétermier, M., Bouhouche, K., Cohen, J., Duret, L., Kapusta, A., Meyer, E. and Sperling, L. (2010) Gene expression in a paleopolyploid: a transcriptome resource for the ciliate Paramecium tetraurelia. BMC Genomics, 11:547.
- Baharoglu, Z., Lestini, R., Duigou, S., Michel, B. (2010) RNA polymerase mutations that facilitate replication progression in the rep uvrD recF mutant lacking two accessory replicative helicases. Mol Microbiol, 77 (2) 324-36.
- Balbontín, R., Fiorini, F., Figueroa-Bossi, N., Casadesús, J. and Bossi, L. (2010). Recognition of heptameric seed sequence underlies multi-target regulation by RybB small RNA in Salmonella enterica. Molecular Microbiology, 78 (2) 380-94.
- Becker, T., Guiard, B., Thornton, N., Zufall, N., Stroud, DA., Wiedemann, N., Pfanner, N. (2010) Assembly of the Mitochondrial Protein Import Channel: Role of Tom5 in Two-Stage Interaction of Tom40 with the SAM Complex. Mol Biol Cell, 21 (19) 3106-13.
- Beisson, J., Bétermier, M., Bré, M.-H., Cohen, J., Duharcourt , S., Duret, L., Kung, C., Malinsky, S., Meyer, E., Preer, J.-R. and Sperling, L. (2010) Paramecium tetraurelia: The Renaissance of an Early Unicellular Model. CSH Protoc, 2010 (1) pdb.emo140.
- Bénit, P., El-Khoury, R., Schiff, M., Sainsard-Chanet, A., Rustin, P. (2010) Genetic background influences mitochondrial function: modeling mitochondrial disease for therapeutic development. Trends Mol Med, 16 (5) 210-7.
- Bidard, F., Imbeaud, S., Reymond, N., Lespinet, O., Silar, P., Clave, C., Delacroix, H., Berteaux-Lecellier, V. and Debuchy, R. (2010) A general framework for optimization of probes for gene expression microarray and its application to the fungus Podospora anserina. BMC Res Notes, 3 (1) 171.
- Bohnert, M., Rehling, P., Guiard, B., Herrmann, JM., Pfanner, N., van der Laan, M. (2010) Cooperation of stop-transfer and conservative sorting mechanisms in mitochondrial protein transport. Curr Biol, 20 (13) 1227-32.
- Boubakri, H., de Septenville, A.-L., Viguera, E. and Michel, B. (2010) The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo. EMBO J, 29 (1) 145-57. Erratum in: EMBO J. 2010, 29 (1) 278.
- Brooks, MA., Gewartowski, K., Mitsiki, E., Létoquart, J., Pache, RA., Billier, Y., Bertero, M., Corréa, M., Czarnocki-Cieciura, M., Dadlez, M., Henriot, V., Lazar, N., Delbos, L., Lebert, D., Piwowarski, J., Rochaix, P., Böttcher, B., Serrano, L., Séraphin, B., van Tilbeurgh, H., Aloy, P., Perrakis, A., Dziembowski, A. (2010) Systematic Bioinformatics and Experimental Validation of Yeast Complexes Reduces the Rate of Attrition during Structural Investigations. Structure, 18 (9) 1075-82.
- Chacinska, A., van der Laan, M., Mehnert, C.-S., Guiard, B., Mick, D.-U., Hutu, D.-P., Truscott, K., Wiedemann, N., Meisinger, C., Pfanner, N. and Rehling, P. (2010) Distinct forms of mitochondrial TOM-TIM supercomplexes define signal-dependent states of preprotein sorting. Mol Cell Biol, 30 (1) 307-18.
- Chen, C.-L., Rappailles, A., Duquenne, L., Huvet, M., Guilbaud, G., Farinelli, L., Audit, B., d'Aubenton-Carafa, Y., Arneodo, A., Hyrien, O. and Thermes, C. (2010) Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes. Genome Res, 20 (4) 447-57.
- Colin, J., Libri, D., Villa, T. (2010) Sex matters in the birth of genes. Cell Res, 20 (5) 499-501.
- Cormier, L. Barbey, R. and Kuras, L. (2010) Transcriptional plasticity through differential assembly of a multiprotein activation complex. Nucleic Acids Res, 38 (15) 4998-5014.
- Cortial, S., Chaignon, P., Iorga, BI., Aymerich, S., Truan, G., Gueguen-Chaignon, V., Meyer, P., Moréra, S., Ouazzani, J. (2010) NADH oxidase activity of Bacillus subtilis nitroreductase NfrA1: insight into its biological role. FEBS Lett, 584 (18) 3916-22.
- Corvest, V., Murrey, DA., Bernard, DG., Knaff, DB., Guiard, B., Hamel, PP. (2010) C-type CytochromeAssembly in Saccharomyces cerevisiae: A Key Residue for Apocytochrome C1/Lyase Interaction. Genetics, 186 (2) 561-71.
- Das, B., Bischerour, J., Val, M.-E. and Barre, F.-X. (2010) Molecular keys of the tropism of integration of the cholera toxin phage. Proc Natl Acad Sci U S A, 107 (9) 4377-82.
- Dray, N., Tessmar-Raible, K., Le Gouar, M., Vibert, L., Christodoulou, F., Schipany, K., Guillou, A., Zantke, J., Snyman, H., Béhague, J., Vervoort, M., Arendt, D., Balavoine, G. (2010) Hedgehog signaling regulates segment formation in the annelid Platynereis. Science, 329 (5989) 339-42.
- Dubarry, N. and Barre, F.-X. (2010) Fully efficient chromosome dimer resolution in Escherichia coli cells lacking the integral membrane domain of FtsK. EMBO J, 29 (3) 597-605.
- Dubarry, N., Possoz, C., Barre, F-X. (2010) Multiple regions along the Escherichia coli FtsK protein are implicated in cell division. Mol Microbiol, 78 (5) 1088-100.
- Effantin, G., Figueroa-Bossi, N., Schoehn, G., Bossi, L., Conway, JF. (2010) The tripartite capsid gene of Salmonella phage Gifsy-2 yields a capsid assembly pathway engaging features from HK97 and lambda. Virology, 402 (2) 355-65.
- El-Khoury, R. and Sainsard-Chanet, A. (2010) Deletion of the mitochondrial NADH kinase increases mitochondrial DNA stability and life span in the filamentous fungus Podospora anserina. Exp Gerontol, 45 (7-8) 543-9.
- Fon Tacer, KF., Pompon, D., Rozman, D. (2010) Adaptation of cholesterol synthesis to fasting and TNF-alpha: Profiling cholesterol intermediates in the liver, brain, and testis. J Steroid Biochem Mol Biol, 121 (3-5) 619-25.
- François, N. (2010) Analyse d'interactions moléculaires à haut débit. Thèse Université Paris Descartes, soutenue le 21 juin 2010, sous la direction de Hervé Delacroix, Université Paris-Sud 11 et de Françoise Prêteux, MINES ParisTech.
- Gandille, P., Narbonne-Reveau K., Boissonneau, E., Randsholt, N., Busson, D, Pret, A-M. (2010) Mutations in the polycomb group gene polyhomeotic lead to epithelial instability in both the ovary and wing imaginal disc in Drosophila. PLoS One, 5 (11) e13946.
- Guilbaud, G. (2010) Etude du programme de réplication du génome humain par peignage moléculaire de l’ADN et séquençage massif. Thèse de l'Université Denis Diderot (Paris VII), soutenue le 23 septembre 2010, sous la direction de Claude Thermes et Olivier Hyrien.
- Hassani, B. K., Steunou, AS., Liotenberg, S., Reiss-Husson, F., Astier, C., Ouchane, S. (2010) Adaptation to oxygen: Role of terminal oxidases in photosynthesis initiation in the purple photosynthetic bacterium, Rubrivivax gelatinosus. J Biol Chem, 285 (26) 19891-9.
- Hassani, B. K., Astier, C., Nitschke, W., Ouchane, S. (2010) CtpA a copper-translocating P-type ATPase involved in the biogenesis of multiple copper-requiring enzymes. J Biol Chem, 285 (25) 19330-7.
- Havrylenko, S., Legouis, R., Negrutskii, B., Mirande, M. (2010) Methionyl-tRNA synthetase from Caenorhabditis elegans. A specific multi-domain organization for convergent functional evolution. Protein Sci, 19 (12) 2475-84.
- Henri, J., Rispal, D., Bayart, E., van Tilbeurgh, H., Seraphin, B., Graille, M. (2010) Structural and functional insights into S. cerevisiae Tpa1, a putative prolyl hydroxylase influencing translation termination and transcription. J Biol Chem, 285 (40) 30767-78.
- Janssen, R., Le Gouar,M., Pechmann,..., Vervoort, M., Damen, W., Balavoine, G., McGregor, A-P. (2010) Conservation, loss, and redeployment of Wnt ligands in protostomes: implications for understanding the evolution of segment formation.BMC Evolutionary Biology, 10:374.
- Jerka-Dziadosz, M., Gogendeau, D., Klotz, C., Cohen, J., Beisson, J. and Koll, F. (2010) Basal body duplication in Paramecium: the key role of Bld10 in assembly and stability of the cartwheel. Cytoskeleton (Hoboken), 67 (3) 161-71.
- Kapusta, A. (2010) Réarrangements du génome chez Paramecium tetraurelia : ligases ADN et voies de End-Joining. Thèse Université Paris-Sud 11, soutenue le 29 septembre 2010, sous la direction de Mireille Bétermier.
- Khalfaoui Hassani, B. (2010) Oxydases terminales chez la bactérie pourpre Rubrivivax gelatinosus : rôle et mise ne place dans la membrane. Thèse Université Paris-Sud 11, soutenue le 14 avril 2010, sous la direction de Chantal Astier.
- Khalimonchuk, O., Bestwick, M., Meunier, B., Watts, T.-C. and Winge, D.-R. (2010) Formation of the redox cofactor centers during Cox1 maturation in yeast cytochrome oxidase. Mol Cell Biol, 30 (4) 1004-17.
- Khammari, A. (2010) Analyse génétique de l'apoptose des cellules polaires de l'ovaire de Drosophile. Thèse Université Pierre et Marie Curie, soutenue le 3 mai 2010 sous la direction de Anne-Marie Pret.
- Kühl, I. (2010) La traduction mitochondriale et la transformation biolistique chez la levure Saccharomyces pombe (Mitochnodrial translation and transformation in the fission yeast Saccharomyces pombe as a model system). Thèse Université Versailles-Saint-Quentin. Soutenue le 17 décembre 2010, sous la direction de Nathalie Bonnefoy.
- Laisné, A., Pompon, D., Leroy, J.-L. (2010) [C7GC4]4 Association into supra molecular i-motif structures. Nucleic Acids Res, 38 (11) 3817-26.
- Laligné, C., Klotz, C., Garreau de Loubresse, N., Lemullois, M., Hori, M., Laurent, F.-X., Papon, J.-F., Louis, B., Cohen, J. and Koll, F. (2010) Bug22p, a conserved centrosomal/ciliary protein also present in higher plants is required for an effective ciliary stroke in Paramecium. Eukaryot Cell, 9 (4) 645-55.
- Libri, D. (2010) Nuclear poly(a)-binding proteins and nuclear degradation: take the mRNA and run? Mol Cell, 37 (1) 3-5.
- Loe-Mie, Y., Lepagnol-Bestel, AM., Maussion, G., Doron-Faigenboim, A., Imbeaud, S., Delacroix, H., Aggerbeck, L., Pupko, T., Gorwood, P., Simonneau, M., Moalic, JM. (2010) SMARCA2 and other genome-wide supported schizophrenia-associated genes: regulation by REST/NRSF, network organization and primate-specific evolution. Hum Mol Genet, 19 (14) 2841-57.
- Maas, MF., Sellem, CH., Krause, F., Dencher, NA., Sainsard-Chanet, A. (2010) Molecular gene therapy: Overexpression of the alternative NADH dehydrogenase NDI1 restores overall physiology in a fungal model of respiratory complex I deficiency. J Mol Biol, 399 (1) 31-40.
- Manosas, M., Meglio, A., Spiering, MM., Ding, F., Benkovic, SJ., Barre, FX., Saleh, OA., Allemand, JF., Bensimon, D., Croquette, V. (2010) Magnetic tweezers for the study of DNA tracking motors. Methods Enzymol, 475, 297-320. Walter, NG. Ed., Academic Press, San Diego, USA.
- Mathieu, L., Bourens, M., Marsy, S., Hlavacek, O., Panozzo, C. and Dujardin, G. (2010) A mutational analysis reveals new functional interactions between domains of the Oxa1 protein in Saccharomyces cerevisiae. Mol Microbiol, 75 (2) 474-88.
- Maunoury, N., ..., Agier, N., Marisa, L., Vaubert, D., Delacroix, H., ... Aggerbeck, L., Kondorosi, E., Mergaert, P. (2010) Differentiation of symbiotic cells and endosymbionts in Medicago truncatula nodulation are coupled to two transcriptome-switches. PLoS One, 5 (3) e9519.
- Michelet, X., Djeddi, A. and Legouis, R. (2010) Developmental and cellular functions of ESCRT machinery in pluricellular organisms. Biol Cell, 102 (3) 191-202.
- Montagne, J., Lecerf, C., Parvy, J.-P., Bennion, J. M., Radimerski, T., Ruhf,M.-L., Zilbermann, F., Vouilloz, N., Stocker, H., Hafen, E., Kozma, S. C. Thomas, G. (2010) The Nuclear Receptor DHR3 Modulates DS6 Kinase-Dependent Growth in Drosophila. PLOS Genetics, 6, e1000937.
- Mullineux, ST., Costa, M., Bassi, GS., Michel, F., Hausner, G. (2010) A group II intron encodes a functional LAGLIDADG homing endonuclease and self-splices under moderate temperature and ionic conditions. RNA, 16 (9) :1818-31.
- Nunez, M., Guittet, E., Pompon, D.,van Heijenoort, C., Truan, G. (2010) NMR structure note: oxidized microsomal human cytochrome b5. J Biomol NMR, 47 (7) 289-95.
- Oulion, S., Debiais-Thibaud, M., D'Aubenton-Carafa, Y., Thermes, C., Da Silva, C., Bernard-Samain, S., Gavory, F., Wincker, P., Mazan, S. and Casane, D. (2010) Evolution of Hox gene clusters in gnathostomes: insights from a survey of a shark (Scyliorhinus canicula) transcriptome. Mol Biol Evol, 27 (12) 2829-38.
- Panchal, M., Loeper, J., Cossec, J., Perruchini, C., Lazar, A., Pompon, D. and Duyckaerts, C. (2010) Enrichment of cholesterol in microdissected Alzheimer disease senile plaques as assessed by mass spectrometry. J Lipid Res, 51 (3) 598-605.
- Panozzo, C., Bourens, M., Nowacka, A. and Herbert, C.-J. (2010) Mutations in the C-terminus of the conserved NDR kinase, Cbk1p of Saccharomyces cerevisiae, make the protein independent of upstream activators. Mol Genet Genomics, 283 (2) 111-22.
- Thornton, N., Stroud, D.-A., Milenkovic, D., Guiard, B., Pfanner, N. and Becker, T. (2010) Two Modular Forms of the Mitochondrial Sorting and Assembly Machinery Are Involved in Biogenesis of alpha-Helical Outer Membrane Proteins. J Mol Biol, 396 (3) 540-549.
- Truan, G. (2010) Interactions et reconnaissances protéines-substrats et protéines-protéines au sein du complexe de transfert d’électrons lié aux cytochromes P450. Habilitation à Diriger les Recherches soutenue le 20 décembre, Université Paris-Sud 11.
- Turpaev, K., Glatigny, A., Bignon, J., Delacroix, H. and Drapier, J.-C. (2010) Variation in gene expression profiles of human monocytic U937 cells exposed to various fluxes of nitric oxide. Free Radic Biol Med, 48 (2) 298-305.
- Vaillant, C., Palmeira, L., Chevereau, G., Audit, B., d'Aubenton-Carafa, Y., Thermes, C. and Arneodo, A. (2010) A novel strategy of transcription regulation by intra-genic nucleosome ordering. Genome Res, 20 (1) 59-67.
- Vallet-Gely, I., Opota, O., Boniface, A., Novikov, A., Lemaitre, B. (2010) A secondary metabolite acting as a signaling molecule controls Pseudomonas entomophila virulence. Cell Microbiol, 12 (11) 1666-79.
- Vallet-Gely, I., Novikov, A., Augusto, L., Liehl, P., Bolbach, G., Péchy-Tarr, M., Cosson, P., Keel, C., Caroff, M., Lemaitre, B. (2010) Association of hemolytic activity of Pseudomonas entomophila, a versatile soil bacterium, with cyclic lipopeptide production. Appl Environ Microbiol, 76 (3) 910-21.
- van Diepeningen, A.-D., Maas, M.-F., Huberts, D.-H., Goedbloed, D.-J., Engelmoer, D.-J., Slakhorst, S.-M., Koopmanschap, A.-B., Krause, F., Dencher, N.-A., Sellem, C.-H., Sainsard-Chanet, A., Hoekstra, R.-F. and Debets, A.-J. (2010) Calorie restriction causes healthy life span extension in the filamentous fungus Podospora anserina. Mech Ageing Dev, 131 (1) 60-8.
- van den Elzen, AM., Henri, J., Lazar, N, Gas, ME., Durand, D., Lacroute, F., Nicaise, M., van Tilbeurgh, H., Séraphin, B., Graille, M. (2010) Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways. Nat Struct Mol Biol, 17 (12) 1446-52.
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