CGM - Vie scientifique
Séminaires 2012
Programmation des séminaires externes et des soutenances de thèses
MàJ : 03/02/12
Les exposés ont lieu dans la salle de conférences G. Prévost, bâtiment 23-24 du Campus CNRS de Gif-sur-Yvette (sauf mention particulière).
- Avril
- 12 M. Blokesch
- Février
- 16 P. Maergert
- Janvier
- 12 H. Vaucheret
- 19 A. Goldar
Voir aussi la programmation des séminaires dans les autres laboratoires et instituts d'Ile-de-France.
Pr. Melanie BLOCKESCH
Laboratory of Molecular Microbiologie
École polytechnique fédérale de Lausanne, Switzerland
"Love" in the Time of Cholera – Horizontal gene transfer between Vibrio cholerae strains
Invitée par François-Xavier Barre (01 69 82 32 24)
Résumé
The etiological agent of the disease cholera, Vibrio cholerae, is an aquatic bacterium often encountered in rivers, estuaries and coastal regions. Within this environmental niche, the bacterium often associates with the chitinous exoskeleton of zooplankton. Colonization of such chitin surfaces triggers the onset of a developmental program known as natural competence for transformation.
We studied the regulatory network of this mode of horizontal gene transfer in great detail and discovered that at least three interconnected signaling cascades are required for competence induction. These signaling pathways are based on bacterial metabolism, carbon catabolite repression, and group behavior.
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Pr. Judith ARMITAGE
Oxford Centre for Integrative Systems Biology
Department of Biochemistry
- University of Oxford
How do bacteria know where to go? Rotary motors and protein dynamics drive bacterial behaviour
Invitée par François-Xavier Barre (01 69 82 32 24)
Résumé
Bacteria swim by rotating helical flagella using the movement of ions through transmembrane rings of proteins to drive rotation at speeds of up to 1500Hz. The switching frequency of the motors from counter clockwise to clockwise is controlled by a sensory system, and biases the swimming direction to an optimum environment for growth. Chemosensory regulated swimming is a major factor in virulence, biofilm formation and environmental cycling.
Using a combination of molecular genetics, biochemistry, biophysics, structural biology, in vivo imaging and modelling we have identified unexpected mechanisms localising proteins within bacterial cell, ensuring balanced sensory signalling, and shown that the flagellar motor is not the simple "electric motor" described in text books.
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Robert DRILLIEN
Institut de Génétique et de Biologie Moléculaire et Cellulaire
INSERM U596 / CNRS - UMR7104, Illkirch
Vaccinia virus overexpression of proteins in mammalian cells for fonctional and structural studies
Invité par Georges Beaud (01 69 82 31 49)
Résumé
Viruses are well suited as vectors for high level expression of proteins in mammalian cells. We have developed an expression system based on a strain of vaccinia virus (modified vaccinia virus Ankara, MVA) that is safe for laboratory workers and can be handled under BSL1 containment. Vaccinia recombinants were designed to encode the bacteriophage T7 RNA polymerase under the control of a vaccinia promoter and E.coli lac operator while the gene of interest is under the control of a phage T7 promoter and lac operator.
Recombinant virus construction is carried out in the absence of foreign protein expression which is turned on by adding the inducer IPTG. Using this procedure protein expression can be as high as 15mg for 108 cells and a single protein species can be purified to mg levels from a few liters of cell culture. To simplify gene cloning we have devised specialized plasmids that add one of a series of purification tags at the N-terminus of the gene of interest and enable straightforward Gateway recombination to create the plasmid needed for isolation of recombinant viruses. Protein expression is carried out in suspension cell cultures grown in orbital shakers. Current improvements are being attempted to accelerate the process of recombinant virus isolation.
So far about 10 different full length mammalian proteins have been successfully expressed, some in instances where E. coli or baculovirus expression failed. Several examples of protein expression, purification, biochemical and biophysical characterization will be illustrated (HIV integrase, tubulin tyrosine ligase-like 12).
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Salle de conférences du Centre de Génétique Moléculaire
Bâtiment 23-24, CNRS Gif-sur-Yvette
Soufian OUCHANE
Biogenèse des complexes bioénergétiques et formation du biofilm chez Rubrivivax gelatinosus :
effet de l’oxygène, la lumière et le cuivre
Soutenance d'Habilitation à Diriger des Recherches - Université Paris-Sud 11
Devant un jury constitué de :
Prof. Annie Sainsard-Chanet
Prof. Chantal Astier
Dr. Ursula Liebl
Dr. Francis André Wollman
Dr. Eric Giraud
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Peter MERGAERT
Institut des Sciences du Végétal, CNRS, Gif-sur-Yvette
titre en attente
Invité par Frédéric Boccard (01 69 82 32 20)
Résumé
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Arach GOLDAR
IBITECs, CEA, Saclay
Regulation of DNA replication in S. cerevisiae
Invité par Kathrin Marheineke (01 69 82 43 87)
Résumé
The complete and faithful transmission of eukaryotic genome to daughter cells involves the timely duplication of mother cell's DNA. DNA replication starts at multiple chromosomal positions called replication origin. From each activated replication origin two replication forks progress in opposite direction and duplicate the mother cell's DNA. While it is widely accepted that in eukaryotic organisms replication origins are activated in a stochastic manner, little is known on the sources of the observed stochasticity. It is often associated to the population variability to enter S phase.
We extract from a growing Saccharomyces cerevisiae population the average rate of origin activation in a single cell by combining single molecule measurements and a numerical deconvolution technique. We show that the temporal profile of the rate of origin activation in a single cell is similar to the one extracted from a replicating cell population. Taking into account this observation we exclude the population variability as the origin of observed stochasticity in origin activation. We confirm that the rate of origin activation increases in the early stage of S phase and decreases at the latter stage. The population average activation rate extracted from single molecule analysis is in prefect accordance with the activation rate extracted from published micro-array data, confirming therefore the homogeneity and genome scale invariance of dynamic of replication process. All these observations point toward a possible role of replication fork to control the rate of origin activation.
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Hervé VAUCHERET
Institut Jean-Pierre Bourgin, INRA, Versailles
Small RNA mediated silencing: lessons from plants
Invité par Annie Sainsard-Chanet (01 69 82 43 70)
Résumé
MicroRNAs (miRNAs) and short interfering RNAs (siRNAs) are involved in a variety of phenomena that are essential for genome stability, development and adaptive responses to biotic and abiotic stresses. Their mode of action also is diverse. They guide DNA elimination during the formation of the macronucleus in protists and heterochromatin assembly in fungi and plants. They target endogenous mRNAs for cleavage and translational repression in plants and animals, and protect both plant and animal cells against virus infection through an RNA-based immune system. They also control the movement of transposable elements at the transcriptional and posttranscriptional level in plants and animals. Small RNA pathways coexist with RNA quality control (RQC) pathways that target endogenous aberrant RNA for degradation. Here I will present specificities, redundancies and antagonisms among the various plant small RNA pathways and the crosstalk between RQC and RNA silencing pathways.
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Programmation des séminaires des années précédentes au CGM :
- séminaires de 2009
- séminaires de 2008
- séminaires de 2007
- séminaires de 2006
- séminaires de 2005
- séminaires de 2004
Programmation des séminaires dans les autres laboratoires et instituts d'Ile-de France
LEGS, Gif |
Institut Curie, Paris et Orsay |
LEBS, Gif |
Institut Jacques Monod, Paris-Jussieu |
INAF, Gif |
IBPC, Paris |
ISV, Gif |
IBENS, (Institut de Biologie de l'ENS) Paris |
ICSN, Gif |
Institut Pasteur, Paris |
LVMS, Gif |
Collège de France, Paris |
IBP, Moulon, Orsay |
Institut Cochin, Paris |
IFR 58 Les Cordeliers, Paris |
|
IBBMC, Orsay |
IGR, Villejuif |
iBiTec-S, CEA Saclay |
Généthon (Génocentre), Evry |
3Bio, CEA, Saclay |
UMR 8080 (ex-IBAIC), Orsay |
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